"""Tests of interaction of matrix with other parts of numpy. Note that tests with MaskedArray and linalg are done in separate files. """ from __future__ import division, absolute_import, print_function import pytest import textwrap import warnings import numpy as np from numpy.testing import (assert_, assert_equal, assert_raises, assert_raises_regex, assert_array_equal, assert_almost_equal, assert_array_almost_equal) def test_fancy_indexing(): # The matrix class messes with the shape. While this is always # weird (getitem is not used, it does not have setitem nor knows # about fancy indexing), this tests gh-3110 # 2018-04-29: moved here from core.tests.test_index. m = np.matrix([[1, 2], [3, 4]]) assert_(isinstance(m[[0, 1, 0], :], np.matrix)) # gh-3110. Note the transpose currently because matrices do *not* # support dimension fixing for fancy indexing correctly. x = np.asmatrix(np.arange(50).reshape(5, 10)) assert_equal(x[:2, np.array(-1)], x[:2, -1].T) def test_polynomial_mapdomain(): # test that polynomial preserved matrix subtype. # 2018-04-29: moved here from polynomial.tests.polyutils. dom1 = [0, 4] dom2 = [1, 3] x = np.matrix([dom1, dom1]) res = np.polynomial.polyutils.mapdomain(x, dom1, dom2) assert_(isinstance(res, np.matrix)) def test_sort_matrix_none(): # 2018-04-29: moved here from core.tests.test_multiarray a = np.matrix([[2, 1, 0]]) actual = np.sort(a, axis=None) expected = np.matrix([[0, 1, 2]]) assert_equal(actual, expected) assert_(type(expected) is np.matrix) def test_partition_matrix_none(): # gh-4301 # 2018-04-29: moved here from core.tests.test_multiarray a = np.matrix([[2, 1, 0]]) actual = np.partition(a, 1, axis=None) expected = np.matrix([[0, 1, 2]]) assert_equal(actual, expected) assert_(type(expected) is np.matrix) def test_dot_scalar_and_matrix_of_objects(): # Ticket #2469 # 2018-04-29: moved here from core.tests.test_multiarray arr = np.matrix([1, 2], dtype=object) desired = np.matrix([[3, 6]], dtype=object) assert_equal(np.dot(arr, 3), desired) assert_equal(np.dot(3, arr), desired) def test_inner_scalar_and_matrix(): # 2018-04-29: moved here from core.tests.test_multiarray for dt in np.typecodes['AllInteger'] + np.typecodes['AllFloat'] + '?': sca = np.array(3, dtype=dt)[()] arr = np.matrix([[1, 2], [3, 4]], dtype=dt) desired = np.matrix([[3, 6], [9, 12]], dtype=dt) assert_equal(np.inner(arr, sca), desired) assert_equal(np.inner(sca, arr), desired) def test_inner_scalar_and_matrix_of_objects(): # Ticket #4482 # 2018-04-29: moved here from core.tests.test_multiarray arr = np.matrix([1, 2], dtype=object) desired = np.matrix([[3, 6]], dtype=object) assert_equal(np.inner(arr, 3), desired) assert_equal(np.inner(3, arr), desired) def test_iter_allocate_output_subtype(): # Make sure that the subtype with priority wins # 2018-04-29: moved here from core.tests.test_nditer, given the # matrix specific shape test. # matrix vs ndarray a = np.matrix([[1, 2], [3, 4]]) b = np.arange(4).reshape(2, 2).T i = np.nditer([a, b, None], [], [['readonly'], ['readonly'], ['writeonly', 'allocate']]) assert_(type(i.operands[2]) is np.matrix) assert_(type(i.operands[2]) is not np.ndarray) assert_equal(i.operands[2].shape, (2, 2)) # matrix always wants things to be 2D b = np.arange(4).reshape(1, 2, 2) assert_raises(RuntimeError, np.nditer, [a, b, None], [], [['readonly'], ['readonly'], ['writeonly', 'allocate']]) # but if subtypes are disabled, the result can still work i = np.nditer([a, b, None], [], [['readonly'], ['readonly'], ['writeonly', 'allocate', 'no_subtype']]) assert_(type(i.operands[2]) is np.ndarray) assert_(type(i.operands[2]) is not np.matrix) assert_equal(i.operands[2].shape, (1, 2, 2)) def like_function(): # 2018-04-29: moved here from core.tests.test_numeric a = np.matrix([[1, 2], [3, 4]]) for like_function in np.zeros_like, np.ones_like, np.empty_like: b = like_function(a) assert_(type(b) is np.matrix) c = like_function(a, subok=False) assert_(type(c) is not np.matrix) def test_array_astype(): # 2018-04-29: copied here from core.tests.test_api # subok=True passes through a matrix a = np.matrix([[0, 1, 2], [3, 4, 5]], dtype='f4') b = a.astype('f4', subok=True, copy=False) assert_(a is b) # subok=True is default, and creates a subtype on a cast b = a.astype('i4', copy=False) assert_equal(a, b) assert_equal(type(b), np.matrix) # subok=False never returns a matrix b = a.astype('f4', subok=False, copy=False) assert_equal(a, b) assert_(not (a is b)) assert_(type(b) is not np.matrix) def test_stack(): # 2018-04-29: copied here from core.tests.test_shape_base # check np.matrix cannot be stacked m = np.matrix([[1, 2], [3, 4]]) assert_raises_regex(ValueError, 'shape too large to be a matrix', np.stack, [m, m]) def test_object_scalar_multiply(): # Tickets #2469 and #4482 # 2018-04-29: moved here from core.tests.test_ufunc arr = np.matrix([1, 2], dtype=object) desired = np.matrix([[3, 6]], dtype=object) assert_equal(np.multiply(arr, 3), desired) assert_equal(np.multiply(3, arr), desired) def test_nanfunctions_matrices(): # Check that it works and that type and # shape are preserved # 2018-04-29: moved here from core.tests.test_nanfunctions mat = np.matrix(np.eye(3)) for f in [np.nanmin, np.nanmax]: res = f(mat, axis=0) assert_(isinstance(res, np.matrix)) assert_(res.shape == (1, 3)) res = f(mat, axis=1) assert_(isinstance(res, np.matrix)) assert_(res.shape == (3, 1)) res = f(mat) assert_(np.isscalar(res)) # check that rows of nan are dealt with for subclasses (#4628) mat[1] = np.nan for f in [np.nanmin, np.nanmax]: with warnings.catch_warnings(record=True) as w: warnings.simplefilter('always') res = f(mat, axis=0) assert_(isinstance(res, np.matrix)) assert_(not np.any(np.isnan(res))) assert_(len(w) == 0) with warnings.catch_warnings(record=True) as w: warnings.simplefilter('always') res = f(mat, axis=1) assert_(isinstance(res, np.matrix)) assert_(np.isnan(res[1, 0]) and not np.isnan(res[0, 0]) and not np.isnan(res[2, 0])) assert_(len(w) == 1, 'no warning raised') assert_(issubclass(w[0].category, RuntimeWarning)) with warnings.catch_warnings(record=True) as w: warnings.simplefilter('always') res = f(mat) assert_(np.isscalar(res)) assert_(res != np.nan) assert_(len(w) == 0) def test_nanfunctions_matrices_general(): # Check that it works and that type and # shape are preserved # 2018-04-29: moved here from core.tests.test_nanfunctions mat = np.matrix(np.eye(3)) for f in (np.nanargmin, np.nanargmax, np.nansum, np.nanprod, np.nanmean, np.nanvar, np.nanstd): res = f(mat, axis=0) assert_(isinstance(res, np.matrix)) assert_(res.shape == (1, 3)) res = f(mat, axis=1) assert_(isinstance(res, np.matrix)) assert_(res.shape == (3, 1)) res = f(mat) assert_(np.isscalar(res)) for f in np.nancumsum, np.nancumprod: res = f(mat, axis=0) assert_(isinstance(res, np.matrix)) assert_(res.shape == (3, 3)) res = f(mat, axis=1) assert_(isinstance(res, np.matrix)) assert_(res.shape == (3, 3)) res = f(mat) assert_(isinstance(res, np.matrix)) assert_(res.shape == (1, 3*3)) def test_average_matrix(): # 2018-04-29: moved here from core.tests.test_function_base. y = np.matrix(np.random.rand(5, 5)) assert_array_equal(y.mean(0), np.average(y, 0)) a = np.matrix([[1, 2], [3, 4]]) w = np.matrix([[1, 2], [3, 4]]) r = np.average(a, axis=0, weights=w) assert_equal(type(r), np.matrix) assert_equal(r, [[2.5, 10.0/3]]) def test_trapz_matrix(): # Test to make sure matrices give the same answer as ndarrays # 2018-04-29: moved here from core.tests.test_function_base. x = np.linspace(0, 5) y = x * x r = np.trapz(y, x) mx = np.matrix(x) my = np.matrix(y) mr = np.trapz(my, mx) assert_almost_equal(mr, r) def test_ediff1d_matrix(): # 2018-04-29: moved here from core.tests.test_arraysetops. assert(isinstance(np.ediff1d(np.matrix(1)), np.matrix)) assert(isinstance(np.ediff1d(np.matrix(1), to_begin=1), np.matrix)) def test_apply_along_axis_matrix(): # this test is particularly malicious because matrix # refuses to become 1d # 2018-04-29: moved here from core.tests.test_shape_base. def double(row): return row * 2 m = np.matrix([[0, 1], [2, 3]]) expected = np.matrix([[0, 2], [4, 6]]) result = np.apply_along_axis(double, 0, m) assert_(isinstance(result, np.matrix)) assert_array_equal(result, expected) result = np.apply_along_axis(double, 1, m) assert_(isinstance(result, np.matrix)) assert_array_equal(result, expected) def test_kron_matrix(): # 2018-04-29: moved here from core.tests.test_shape_base. a = np.ones([2, 2]) m = np.asmatrix(a) assert_equal(type(np.kron(a, a)), np.ndarray) assert_equal(type(np.kron(m, m)), np.matrix) assert_equal(type(np.kron(a, m)), np.matrix) assert_equal(type(np.kron(m, a)), np.matrix) class TestConcatenatorMatrix(object): # 2018-04-29: moved here from core.tests.test_index_tricks. def test_matrix(self): a = [1, 2] b = [3, 4] ab_r = np.r_['r', a, b] ab_c = np.r_['c', a, b] assert_equal(type(ab_r), np.matrix) assert_equal(type(ab_c), np.matrix) assert_equal(np.array(ab_r), [[1, 2, 3, 4]]) assert_equal(np.array(ab_c), [[1], [2], [3], [4]]) assert_raises(ValueError, lambda: np.r_['rc', a, b]) def test_matrix_scalar(self): r = np.r_['r', [1, 2], 3] assert_equal(type(r), np.matrix) assert_equal(np.array(r), [[1, 2, 3]]) def test_matrix_builder(self): a = np.array([1]) b = np.array([2]) c = np.array([3]) d = np.array([4]) actual = np.r_['a, b; c, d'] expected = np.bmat([[a, b], [c, d]]) assert_equal(actual, expected) assert_equal(type(actual), type(expected)) def test_array_equal_error_message_matrix(): # 2018-04-29: moved here from testing.tests.test_utils. try: assert_equal(np.array([1, 2]), np.matrix([1, 2])) except AssertionError as e: msg = str(e) msg2 = msg.replace("shapes (2L,), (1L, 2L)", "shapes (2,), (1, 2)") msg_reference = textwrap.dedent("""\ Arrays are not equal (shapes (2,), (1, 2) mismatch) x: array([1, 2]) y: matrix([[1, 2]])""") try: assert_equal(msg, msg_reference) except AssertionError: assert_equal(msg2, msg_reference) else: raise AssertionError("Did not raise") def test_array_almost_equal_matrix(): # Matrix slicing keeps things 2-D, while array does not necessarily. # See gh-8452. # 2018-04-29: moved here from testing.tests.test_utils. m1 = np.matrix([[1., 2.]]) m2 = np.matrix([[1., np.nan]]) m3 = np.matrix([[1., -np.inf]]) m4 = np.matrix([[np.nan, np.inf]]) m5 = np.matrix([[1., 2.], [np.nan, np.inf]]) for assert_func in assert_array_almost_equal, assert_almost_equal: for m in m1, m2, m3, m4, m5: assert_func(m, m) a = np.array(m) assert_func(a, m) assert_func(m, a)